BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F08SP1|AL425002
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1740 1874 0.0
>3x_Contig1740
Length = 21823
Score = 1874 bits (942), Expect = 0.0
Identities = 961/968 (99%), Gaps = 2/968 (0%)
Strand = Plus / Minus
Query: 1 atgttttaccttcaataggtttcctgtcatgatttggtacgaaagagaactcacgtagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12391 atgttttaccttcaataggtttcctgtcatgatttggtacgaaagagaactcacgtagat 12332
Query: 61 aactagaaatttagcctcttttgtaagthactattgattgacgttcaagattactctgac 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 12331 aactagaaatttagcctcttttgtaagtaactattgattgacgttcaagattactctgac 12272
Query: 121 gtttgttttgaagaaagtttgaatatgtcgtgtattataaagatatcgatatgcttctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12271 gtttgttttgaagaaagtttgaatatgtcgtgtattataaagatatcgatatgcttctta 12212
Query: 181 cacaactaaactttggattcaatatcttttgatctttgtttagataaaaatatgcacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12211 cacaactaaactttggattcaatatcttttgatctttgtttagataaaaatatgcacctt 12152
Query: 241 tttatcatttcaggtgtgatcttagagtcacctccgatgattgttgcagccttgaattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12151 tttatcatttcaggtgtgatcttagagtcacctccgatgattgttgcagccttgaattga 12092
Query: 301 ccatttttgttcgttgtcaaggacaatgtagatagaattgatgattcctcggcctctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12091 ccatttttgttcgttgtcaaggacaatgtagatagaattgatgattcctcggcctctgtt 12032
Query: 361 tctatatccgctaataatactgaagttggtttatccacgtccatttcgtcatcatttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12031 tctatatccgctaataatactgaagttggtttatccacgtccatttcgtcatcatttttg 11972
Query: 421 gccaattgtgctaaaggttcgatgtcaatgattccgtagtttgaaccatagcataattct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11971 gccaattgtgctaaaggttcgatgtcaatgattccgtagtttgaaccatagcataattct 11912
Query: 481 ccttcgttcaattttaaaggtaaagatttgtgtgggtcgcataagatgtcgtatgtttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11911 ccttcgttcaattttaaaggtaaagatttgtgtgggtcgcataagatgtcgtatgtttca 11852
Query: 541 cgaattgtcatactacgacctcgggttcttatagcaattttcaaatcagcagcacgttcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11851 cgaattgtcatactacgacctcgggttcttatagcaattttcaaatcagcagcacgttcg 11792
Query: 601 tctaggaaagctctaggtagttgcactgtttttagcgcactaatcaaagaattccaacag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11791 tctaggaaagctctaggtagttgcactgtttttagcgcactaatcaaagaattccaacag 11732
Query: 661 agatcataaattggaccgttacggctgaaaacttgtattttggcataaagcacataggac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11731 agatcataaattggaccgttacggctgaaaacttgtattttggcataaagcacataggac 11672
Query: 721 catttcctattgtttgcttcattaatttttttctcctcatcgagwagctcgtcactgtat 780
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11671 catttcctattgtttgcttcattaatttttttctcctcatcgagtagctcgtcactgtat 11612
Query: 781 attgtggtgacacttccatcttcttcagtmctgmgaataccgcacgatacagccaaagct 840
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 11611 attgtggtgacacttccatcttcttcagtcctgcgaataccgcacgatacagccaaagct 11552
Query: 841 gttttcttaagaattccagaatgtaagagtgtcttgtatagcttttctgaagtgatcatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11551 gttttcttaagaattccagaatgtaagagtgtcttgtatagcttttctgaagtgatcatc 11492
Query: 901 tcttcatcggtagga-caccaacacgtycacgttgta-ctctactacgggataaatagtt 958
||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 11491 tcttcatcggtaggaccaccaacacgtccacgttgtacctctactacgggataaatagtt 11432
Query: 959 gaattttc 966
||||||||
Sbjct: 11431 gaattttc 11424
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7691
Number of Sequences: 1807
Number of extensions: 7691
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)